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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs3974442 chr11:49582457 G/C FOLH1B chr11:89372395-89431886:+ -0.35 -6.44 2.9E-10 Box Plot
THCA rs3974703 chr11:49307511 T/G FOLH1B chr11:89372395-89431886:+ 0.45 7.52 2.74E-13 Box Plot
THCA rs3974730 chr11:49201613 C/T FOLH1B chr11:89372395-89431886:+ -0.37 -6.39 3.84E-10 Box Plot
THCA rs3974936 chr11:49005012 C/T FOLH1B chr11:89372395-89431886:+ 0.43 6.3 6.74E-10 Box Plot
THCA rs3979376 chr2:113225155 A/G RGPD5 chr2:110550335-110615272:+ 0.34 6.94 1.28E-11 Box Plot
THCA rs3980070 chr2:113273031 AAGT/A RGPD5 chr2:110550335-110615272:+ -0.36 -6.3 6.89E-10 Box Plot
THCA rs3981801 chr7:65094579 G/C RABGEF1 chr7:66147151-66276451:+ 0.49 6.26 8.47E-10 Box Plot
THCA rs398717 chr21:44001164 A/G TLN1 chr9:35696945-35732392:- 0.22 6.15 1.62E-9 Box Plot
THCA rs3989103 chr8:11306846 G/A SGK223 chr8:8175258-8244008:- -0.37 -7.23 1.88E-12 Box Plot
THCA rs3999429 chr6:26760783 C/T ZNF322B chr9:99957633-99961910:- -0.66 -10.69 4.45E-24 Box Plot
THCA rs3999450 chr6:26756317 AAGAGAC/A ZNF322B chr9:99957633-99961910:- 0.7 13.48 2.49E-35 Box Plot
THCA rs3999476 chr6:26618276 G/A ZNF322B chr9:99957633-99961910:- 0.76 15.67 6.06E-45 Box Plot
THCA rs4000126 chr7:33062045 AAC/A FKBP9L chr7:55748767-55780945:- 0.42 9.51 9.2E-20 Box Plot
THCA rs4000129 chr7:33113699 T/TAA FKBP9L chr7:55748767-55780945:- 0.4 7.48 3.71E-13 Box Plot
THCA rs4002639 chr5:18430912 C/CAA GNB4 chr3:179113877-179169378:- 0.34 6.11 2.03E-9 Box Plot